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Last Update: 16.05.2012 |
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Fluch S, Kopecky D, Burg K, Simkova H, Taudien S, Petzold A, Kubalakova M, Platzer M, Berenyi M, Krainer S, Dolezel J, Lelley T (2012) |
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Sequence Composition and Gene Content of the Short Arm of Rye (Secale cereale) Chromosome 1 |
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PLoS One 7: e30784
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Kirschner J, Weber D, Neuschl C, Franke A, Bottger M, Zielke L, Powalsky E, Groth M, Shagin D, Petzold A, Hartmann N, Englert C, Brockmann GA, Platzer M, Cellerino A, Reichwald K (2012) |
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Mapping of quantitative trait loci controlling lifespan in the short-lived fish Nothobranchius furzeri- a new vertebrate model for age research |
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Aging Cell 11: 252-261
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Mameaux S, Cockram J, Thiel T, Steuernagel B, Stein N, Taudien S, Jack P, Werner P, Gray JC, Greenland AJ, Powell W (2012) |
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Molecular, phylogenetic and comparative genomic analysis of the cytokinin oxidase/dehydrogenase gene family in the Poaceae |
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Plant Biotechnol J 10: 67-82
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Ping L, Platzer M, Wen G, Delaroque N (2012) |
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Coevolution of aah: A dps-Like Gene with the Host Bacterium Revealed by Comparative Genomic Analysis |
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The Scientific World Journal 2012: 504905
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Rhein C, Tripal P, Seebahn A, Konrad A, Kramer M, Nagel C, Kemper J, Bode J, Muhle C, Gulbins E, Reichel M, Becker CM, Kornhuber J (2012) |
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Functional implications of novel human Acid sphingomyelinase splice variants |
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PLoS One 7: e35467
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Wos-Oxley M, Bleich A, Oxley AP, Kahl S, Janus L, Smoczek A, Nahrstedt H, Pils M, Taudien S, Platzer M, Hedrich HJ, Medina E, Pieper D (2012) |
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Comparative evaluation of establishing a human gut microbial community within rodent models |
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Gut Microbes 3 [Epub ahead of print]
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Zarse K, Schmeisser S, Groth M, Priebe S, Beuster G, Kuhlow D, Guthke R, Platzer M, Kahn CR, Ristow M (2012) |
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Impaired Insulin/IGF1 Signaling Extends Life Span by Promoting Mitochondrial L-Proline Catabolism to Induce a Transient ROS Signal |
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Cell Metab 15: 451-465
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Asghar A, Groth M, Siol O, Gaube F, Enzensperger C, Glöckner G, Winckler T (2011) |
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Developmental gene regulation by an ancient intercellular communication system in social amoebae |
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Protist 163: 25-37
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Burmester A, Shelest E, Glöckner G, Heddergott C, Schindler S, Staib P, Heidel A, Felder M, Petzold A, Szafranski K, Feuermann M, Pedruzzi I, Priebe S, Groth M, Winkler R, Li W, Kniemeyer O, Schroeckh V, Hertweck C, Hube B, White TC, Platzer M, Guthke R, Heitman J, Wostemeyer J, Zipfel PF, Monod M, Brakhage AA (2011) |
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Comparative and functional genomics provide insights into the pathogenicity of dermatophytic fungi |
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Genome Biol 12: R7
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Dorn A, Ng'oma E, Janko K, Reichwald K, Polacik M, Platzer M, Cellerino A, Reichard M (2011) |
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Phylogeny, genetic variability and colour polymorphism of an emerging animal model: the short-lived annual Nothobranchius fishes from southern Mozambique |
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Mol Phylogenet Evol 61: 739-749
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Hartmann N, Reichwald K, Wittig I, Drose S, Schmeisser S, Luck C, Hahn C, Graf M, Gausmann U, Terzibasi E, Cellerino A, Ristow M, Brandt U, Platzer M, Englert C (2011) |
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Mitochondrial DNA copy number and function decrease with age in the short-lived fish Nothobranchius furzeri |
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Aging Cell 10: 824-831
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Heidel AJ, Lawal HM, Felder M, Schilde C, Helps NR, Tunggal B, Rivero F, John U, Schleicher M, Eichinger L, Platzer M, Noegel AA, Schaap P, Glöckner G (2011) |
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Phylogeny-wide analysis of social amoeba genomes highlights ancient origins for complex intercellular communication |
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Genome Res 21: 1882-1891
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Herrmann A, Haake A, Ammerpohl O, Martin-Guerrero I, Szafranski K, Stemshorn K, Nothnagel M, Kotsopoulos SK, Richter J, Warner J, Olson J, Link DR, Schreiber S, Krawczak M, Platzer M, Nurnberg P, Siebert R, Hampe J (2011) |
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Pipeline for Large-Scale Microdroplet Bisulfite PCR-Based Sequencing Allows the Tracking of Hepitype Evolution in Tumors |
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PLoS One 6: e21332
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Hribova E, Cizkova J, Christelova P, Taudien S, de Langhe E, Dolezel J (2011) |
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The ITS1-5.8S-ITS2 sequence region in the Musaceae: structure, diversity and use in molecular phylogeny |
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PLoS One 6: e17863
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Hummert C, Mech F, Horn F, Weber M, Drynda S, Gausmann U, Guthke R (2011) |
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Creation and Comparison of Different Chip Definition Files for Affymetrix Microarrays |
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Proc. International Conference on Bioinformatics and Computational Biology BIOCOMP'11, July 18-21, 2011, Las Vegas, USA
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Jacobs G, Hellmig S, Huse K, Titz A, Franke A, Kwiatkowski R, Ott S, Kosmahl M, Fischbach W, Lucius R, Klapper W, Folsch UR, Hampe J, Schreiber S, Rosenstiel P (2011) |
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Polymorphisms in the 3'-untranslated region of the CDH1 gene are a risk factor for primary gastric diffuse large B-cell lymphoma |
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Haematologica 96: 987-995
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Kirsch R, Vogel H, Muck A, Reichwald K, Pasteels JM, Boland W (2011) |
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Host plant shifts affect a major defense enzyme in Chrysomela lapponica |
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Proc Natl Acad Sci U S A 108: 4897-4901
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Kramer M, Huse K, Menzel U, Backhaus O, Rosenstiel P, Schreiber S, Hampe J, Platzer M (2011) |
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Constant splice-isoform ratios in human lymphoblastoid cells support the concept of a splico-stat |
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Genetics 187: 761-770
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Liu H, McNicol J, Bayer M, Morris JA, Cardle L, Marshall DF, Schulte D, Stein N, Shi BJ, Taudien S, Waugh R, Hedley PE (2011) |
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Highly parallel gene-to-BAC addressing using microarrays |
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Biotechniques 50: 165-174
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Mayer KF, Martis M, Hedley PE, Simkova H, Liu H, Morris JA, Steuernagel B, Taudien S, Roessner S, Gundlach H, Kubalakova M, Suchankova P, Murat F, Felder M, Nussbaumer T, Graner A, Salse J, Endo T, Sakai H, Tanaka T, Itoh T, Sato K, Platzer M, Matsumoto T, Scholz U, Dolezel J, Waugh R, Stein N (2011) |
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Unlocking the barley genome by chromosomal and comparative genomics |
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Plant Cell 23: 1249-1263
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Nothnagel M, Herrmann A, Wolf A, Schreiber S, Platzer M, Siebert R, Krawczak M, Hampe J (2011) |
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Technology-specific error signatures in the 1000 Genomes Project data |
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Hum Genet 130: 505-516
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Nothnagel M, Wolf A, Herrmann A, Szafranski K, Vater I, Brosch M, Huse K, Siebert R, Platzer M, Hampe J, Krawczak M (2011) |
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Statistical inference of allelic imbalance from transcriptome data |
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Hum Mutat 32: 98-106
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Parlange F, Oberhaensli S, Breen J, Platzer M, Taudien S, Simkova H, Wicker T, Dolezel J, Keller B (2011) |
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A major invasion of transposable elements accounts for the large size of the Blumeria graminis f.sp. tritici genome |
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Funct Integr Genomics 11: 671-677
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Platzer M, Reichwald K, Hartmann N, Cellerino A, Englert C (2011) |
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Der annuelle Türkise Prachtgrundkärpfling Nothobranchius furzeri als neues Modell für die Alternsforschung |
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In Heiß - Altersmedizin aktuell. vol. 22. GmbH, Verlagsgruppe Hüthig Jehle Rehm, ed. |
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Rashmi RN, Eckes B, Glöckner G, Groth M, Neumann S, Gloy J, Sellin L, Walz G, Schneider M, Karakesisoglou I, Eichinger L, Noegel AA (2011) |
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The nuclear envelope protein Nesprin-2 has roles in cell proliferation and differentiation during wound healing |
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Nucleus 3: [Epub ahead of print]
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Ritz CM, Kohnen I, Groth M, Theissen G, Wissemann V (2011) |
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To be or not to be the odd one out - Allele-specific transcription in pentaploid dogroses (Rosa L. sect. Caninae (DC.) Ser) |
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BMC Plant Biol 11: 37
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Stepanow S, Reichwald K, Huse K, Gausmann U, Nebel A, Rosenstiel P, Wabitsch M, Fischer-Posovszky P, Platzer M (2011) |
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Allele-Specific, Age-Dependent and BMI-Associated DNA Methylation of Human MCHR1 |
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PLoS One 6: e17711
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Taudien S, Steuernagel B, Ariyadasa R, Schulte D, Schmutzer T, Groth M, Felder M, Petzold A, Scholz U, Mayer KF, Stein N, Platzer M (2011) |
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Sequencing of BAC pools by different next generation sequencing platforms and strategies |
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BMC Res Notes 4: 411
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Taudien S, Szafranski K, Felder M, Groth M, Huse K, Raffaelli F, Petzold A, Zhang X, Rosenstiel P, Hampe J, Schreiber S, Platzer M (2011) |
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Comprehensive assessment of sequence variation within the copy number variable defensin cluster on 8p23 by target enriched in-depth 454 sequencing |
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BMC Genomics 12: 243
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Wicker T, Mayer KF, Gundlach H, Martis M, Steuernagel B, Scholz U, Simkova H, Kubalakova M, Choulet F, Taudien S, Platzer M, Feuillet C, Fahima T, Budak H, Dolezel J, Keller B, Stein N (2011) |
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Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives |
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Plant Cell 23: 1706-1718
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Wodniok S, Brinkmann H, Glöckner G, Heidel AJ, Philippe H, Melkonian M, Becker B (2011) |
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Origin of land plants: Do conjugating green algae hold the key? |
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BMC Evol Biol 11: 104
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Yu C, Li Y, Holmes A, Szafranski K, Faulkes CG, Coen CW, Buffenstein R, Platzer M, de Magalhaes JP, Church GM (2011) |
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RNA sequencing reveals differential expression of mitochondrial and oxidation reduction genes in the long-lived naked mole-rat when compared to mice |
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PLoS One 6: e26729
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Zell R, Taudien S, Pfaff F, Wutzler P, Platzer M, Sauerbrei A (2011) |
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Sequencing of 21 varicella-zoster virus genomes reveals two novel genotypes and evidence of recombination |
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J Virol 86: 1608-1622
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Barrantes I, Glöckner G, Meyer S, Marwan W (2010) |
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Transcriptomic changes arising during light-induced sporulation in Physarum polycephalum |
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BMC Genomics 11: 115
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Birkenmeier G, Stegemann C, Hoffmann R, Gunther R, Huse K, Birkemeyer C (2010) |
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Posttranslational modification of human glyoxalase 1 indicates redox-dependent regulation |
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PLoS One 5: e10399
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Gührs KH, Groth M, Grosse F (2010) |
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A label-free assay of exonuclease activity using a pyrosequencing technique |
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Anal Biochem 405: 11-18
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Groth M, Wiegand C, Szafranski K, Huse K, Kramer M, Rosenstiel P, Schreiber S, Norgauer J, Platzer M (2010) |
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Both copy number and sequence variations affect expression of human DEFB4 |
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Genes Immun 11: 458-466
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Hochmuth T, Niederkruger H, Gernert C, Siegl A, Taudien S, Platzer M, Crews P, Hentschel U, Piel J (2010) |
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Linking chemical and microbial diversity in marine sponges: possible role for poribacteria as producers of methyl-branched Fatty acids |
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Chembiochem 11: 2572-2578
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John U, Beszteri S, Glöckner G, Singh R, Medlin L, Cemberella AD (2010) |
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Genomic characterisation of the ichthyotoxic prymnesiophyte Chrysochromulina polylepis, and the expression of polyketide synthase genes in synchronized cultures |
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European Journal of Phycology 45 (3): 215-229
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Kenanov D, Kaleta C, Petzold A, Hoischen C, Diekmann S, Siddiqui RA, Schuster S (2010) |
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Theoretical study of lipid biosynthesis in wild-type Escherichia coli and in a protoplast-type L-form using elementary flux mode analysis |
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Febs J 277: 1023-1034
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Kramer M, Backhaus O, Rosenstiel P, Horn D, Klopocki E, Birkenmeier G, Schreiber S, Platzer M, Hampe J, Huse K (2010) |
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Analysis of relative gene dosage and expression differences of the paralogs RABL2A and RABL2B by Pyrosequencing |
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Gene 455: 1-7
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Kramer M, Boeck J, Reichenbach D, Kaether C, Schreiber S, Platzer M, Rosenstiel P, Huse K (2010) |
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NOD2-C2 - a novel NOD2 isoform activating NF-kappaB in a muramyl dipeptide-independent manner |
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BMC Res Notes 3: 224
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Krugel H, Licht A, Biedermann G, Petzold A, Lassak J, Hupfer Y, Schlott B, Hertweck C, Platzer M, Brantl S, Saluz HP (2010) |
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Cervimycin C resistance in Bacillus subtilis is due to a promoter up-mutation and increased mRNA stability of the constitutive ABC-transporter gene bmrA |
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FEMS Microbiol Lett 313: 155-163
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Lindner I, Hemdan NY, Buchold M, Huse K, Bigl M, Oerlecke I, Ricken A, Gaunitz F, Sack U, Naumann A, Hollborn M, Thal D, Gebhardt R, Birkenmeier G (2010) |
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Alpha2-macroglobulin inhibits the malignant properties of astrocytoma cells by impeding beta-catenin signaling |
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Cancer Res 70: 277-287
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Lurie-Weinberger MN, Gomez-Valero L, Merault N, Glöckner G, Buchrieser C, Gophna U (2010) |
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The origins of eukaryotic-like proteins in Legionella pneumophila |
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Int J Med Microbiol 300: 470-481
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Nowack EC, Vogel H, Groth M, Grossman AR, Melkonian M, Glöckner G (2010) |
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Endosymbiotic Gene Transfer and Transcriptional Regulation of Transferred Genes in Paulinella chromatophora |
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Mol Biol Evol 28: 407-422
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Qiu H, Mathas M, Nestler S, Bengel C, Nem D, Godtel-Armbrust U, Lang T, Taudien S, Burk O, Wojnowski L (2010) |
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The unique complexity of the CYP3A4 upstream region suggests a nongenetic explanation of its expression variability |
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Pharmacogenet Genomics 20: 167-178
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Santhiya ST, Kumar GS, Sudhakar P, Gupta N, Klopp N, Illig T, Soker T, Groth M, Platzer M, Gopinath PM, Graw J (2010) |
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Molecular analysis of cataract families in India: new mutations in the CRYBB2 and GJA3 genes and rare polymorphisms |
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Mol Vis 16: 1837-1847
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Schirmeyer J, Szafranski K, Leipold E, Mawrin C, Platzer M, Heinemann SH (2010) |
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A subtle alternative splicing event of the Na(V)1.8 voltage-gated sodium channel is conserved in human, rat, and mouse |
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J Mol Neurosci 41: 310-314
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Shina MC, Muller R, Blau-Wasser R, Glöckner G, Schleicher M, Eichinger L, Noegel AA, Kolanus W (2010) |
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A cytohesin homolog in Dictyostelium amoebae |
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PLoS One 5: e9378
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Sinha R, Lenser T, Jahn N, Gausmann U, Friedel S, Szafranski K, Huse K, Rosenstiel P, Hampe J, Schuster S, Hiller M, Backofen R, Platzer M (2010) |
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TassDB2 - A comprehensive database of subtle alternative splicing events |
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BMC Bioinformatics 11: 216
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Sinha R, Zimmer AD, Bolte K, Lang D, Reski R, Platzer M, Rensing SA, Backofen R (2010) |
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Identification and characterization of NAGNAG alternative splicing in the moss Physcomitrella patens |
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BMC Plant Biol 10: 76
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Stucken K, John U, Cembella A, Murillo AA, Soto-Liebe K, Fuentes-Valdes JJ, Friedel M, Plominsky AM, Vasquez M, Glöckner G (2010) |
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The smallest known genomes of multicellular and toxic cyanobacteria: comparison, minimal gene sets for linked traits and the evolutionary implications |
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PLoS One 5: e9235
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Taudien S, Groth M, Huse K, Petzold A, Szafranski K, Hampe J, Rosenstiel P, Schreiber S, Platzer M (2010) |
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Haplotyping and copy number estimation of the highly polymorphic human beta-defensin locus on 8p23 by 454 amplicon sequencing |
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BMC Genomics 11: 252
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Tierling S, Souren NY, Gries J, Loporto C, Groth M, Lutsik P, Neitzel H, Utz-Billing I, Gillessen-Kaesbach G, Kentenich H, Griesinger G, Sperling K, Schwinger E, Walter J (2010) |
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Assisted reproductive technologies do not enhance the variability of DNA methylation imprints in human |
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J Med Genet 47: 371-376
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Vogel H, Heidel AJ, Heckel DG, Groot AT (2010) |
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Transcriptome analysis of the sex pheromone gland of the noctuid moth Heliothis virescens |
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BMC Genomics 11: 29
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Wos-Oxley ML, Plumeier I, von Eiff C, Taudien S, Platzer M, Vilchez-Vargas R, Becker K, Pieper DH (2010) |
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A poke into the diversity and associations within human anterior nare microbial communities |
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Isme J 4: 839-851
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Yang I, John U, Beszteri S, Glöckner G, Krock B, Goesmann A, Cembella AD (2010) |
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Comparative gene expression in toxic versus non-toxic strains of the marine dinoflagellate Alexandrium minutum |
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BMC Genomics 11: 248
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Bollig F, Perner B, Besenbeck B, Kothe S, Ebert C, Taudien S, Englert C (2009) |
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A highly conserved retinoic acid responsive element controls wt1a expression in the zebrafish pronephros |
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Development 136: 2883-2892
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ElSharawy A, Hundrieser B, Brosch M, Wittig M, Huse K, Platzer M, Becker A, Simon M, Rosenstiel P, Schreiber S, Krawczak M, Hampe J (2009) |
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Systematic evaluation of the effect of common SNPs on pre-mRNA splicing |
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Hum Mutat 30: 625-632
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Fisch KM, Gurgui C, Heycke N, van der Sar SA, Anderson SA, Webb VL, Taudien S, Platzer M, Rubio BK, Robinson SJ, Crews P, Piel J (2009) |
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Polyketide assembly lines of uncultivated sponge symbionts from structure-based gene targeting |
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Nat Chem Biol 5: 494-501
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Fromme T, Hoffmann C, Nau K, Rozman J, Reichwald K, Utting M, Platzer M, Klingenspor M (2009) |
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An intronic single base exchange leads to a brown adipose tissue-specific loss of Ucp3 expression and an altered body mass trajectory |
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Physiol Genomics 38: 54-62
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Glöckner G, Heidel AJ (2009) |
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Centromere sequence and dynamics in Dictyostelium discoideum |
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Nucleic Acids Res 37: 1809-1816
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Hartmann N, Reichwald K, Lechel A, Graf M, Kirschner J, Dorn A, Terzibasi E, Wellner J, Platzer M, Rudolph KL, Cellerino A, Englert C (2009) |
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Telomeres shorten while Tert expression increases during ageing of the short-lived fish Nothobranchius furzeri |
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Mech Ageing Dev 130: 290-296
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Mayer KF, Taudien S, Martis M, Simkova H, Suchankova P, Gundlach H, Wicker T, Petzold A, Felder M, Steuernagel B, Scholz U, Graner A, Platzer M, Dolezel J, Stein N (2009) |
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Gene Content and Virtual Gene Order of Barley Chromosome 1H |
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Plant Physiol 151: 496-505
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Perne A, Zhang X, Lehmann L, Groth M, Stuber F, Book M (2009) |
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Comparison of multiplex ligation-dependent probe amplification and real-time PCR accuracy for gene copy number quantification using the beta-defensin locus |
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Biotechniques 47: 1023-1028
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Reichwald K, Lauber C, Nanda I, Kirschner J, Hartmann N, Schories S, Gausmann U, Taudien S, Schilhabel MB, Szafranski K, Glöckner G, Schmid M, Cellerino A, Schartl M, Englert C, Platzer M (2009) |
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High tandem repeat content in the genome of the short-lived annual fish Nothobranchius furzeri: a new vertebrate model for aging research |
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Genome Biol 10: R16
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Schindler S, Heiner M, Platzer M, Szafranski K (2009) |
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Comparison of methods for quantification of subtle splice variants |
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Electrophoresis 30: 3674-3681
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Shevchuk O, Batzilla C, Hagele S, Kusch H, Engelmann S, Hecker M, Haas A, Heuner K, Glöckner G, Steinert M (2009) |
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Proteomic analysis of Legionella-containing phagosomes isolated from Dictyostelium |
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Int J Med Microbiol 299: 489-508
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Siddiqui RA, Sauermann U, Altmuller J, Fritzer E, Nothnagel M, Dalibor N, Fellay J, Kaup FJ, Stahl-Hennig C, Nurnberg P, Krawczak M, Platzer M (2009) |
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X chromosomal variation is associated with slow progression to AIDS in HIV-1-infected women |
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Am J Hum Genet 85: 228-239
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Sinha R, Nikolajewa S, Szafranski K, Hiller M, Jahn N, Huse K, Platzer M, Backofen R (2009) |
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Accurate prediction of NAGNAG alternative splicing |
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Nucleic Acids Res 37: 3569-3579
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Song BH, Windsor AJ, Schmid KJ, Ramos-Onsins S, Schranz ME, Heidel AJ, Mitchell-Olds T (2009) |
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Multilocus patterns of nucleotide diversity, population structure and linkage disequilibrium in Boechera stricta, a wild relative of Arabidopsis |
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Genetics 181: 1021-1033
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Steuernagel B, Taudien S, Gundlach H, Seidel M, Ariyadasa R, Schulte D, Petzold A, Felder M, Graner A, Scholz U, Mayer KF, Platzer M, Stein N (2009) |
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De novo 454 sequencing of barcoded BAC pools for comprehensive gene survey and genome analysis in the complex genome of barley |
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BMC Genomics 10: 547
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Valenzano DR, Kirschner J, Kamber RA, Zhang E, Weber D, Cellerino A, Englert C, Platzer M, Reichwald K, Brunet A (2009) |
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Mapping loci associated with tail color and sex determination in the short-lived fish Nothobranchius furzeri |
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Genetics 183: 1385-1395
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Wermter AK, Scherag A, Holter K, Reichwald K, Lichtner P, Siegfried W, Blundell J, Lawton C, Whybrow S, Stubbs J, Arch JR, Meitinger T, Platzer M, Hinney A, Hebebrand J (2009) |
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Procolipase gene: no association with early-onset obesity or fat intake |
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Obes Facts 2: 40-44
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Wicker T, Taudien S, Houben A, Keller B, Graner A, Platzer M, Stein N (2009) |
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A whole-genome snapshot of 454 sequences exposes the composition of the barley genome and provides evidence for parallel evolution of genome size in wheat and barley |
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Plant J 59: 712-722
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Wollbold J, Huber R, Pohlers D, Koczan D, Guthke R, Kinne RW, Gausmann U (2009) |
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Adapted Boolean network models for extracellular matrix formation |
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BMC Syst Biol 3: 77
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Zhang Y, Rohde C, Tierling S, Jurkowski TP, Bock C, Santacruz D, Ragozin S, Reinhardt R, Groth M, Walter J, Jeltsch A (2009) |
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DNA methylation analysis of chromosome 21 gene promoters at single base pair and single allele resolution |
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PLoS Genet 5: e1000438
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Bauer M, Huse K, Settmacher U, Claus RA (2008) |
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The heme oxygenase - carbon monoxide system: regulation and role in stress response and organ failure |
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Intensive Care Med 34: 640-648
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Berg GM, Shrager J, Glöckner G, Arrigo KR, Grossmann AR (2008) |
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Understanding Nitrogen Limitation in Aurecoccus anophageferens (Pelagophyceae) trough cDNA and qRT-PCR analysis |
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J. Phycology 5 44: 1235-1249
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Bortfeldt R, Schindler S, Szafranski K, Schuster S, Holste D (2008) |
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Comparative analysis of sequence features involved in the recognition of tandem splice sites |
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BMC Genomics 9: 202
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Glöckner G, Albert-Weissenberger C, Weinmann E, Jacobi S, Schunder E, Steinert M, Hacker J, Heuner K (2008) |
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Identification and characterization of a new conjugation/type IVA secretion system (trb/tra) of Legionella pneumophila Corby localized on two mobile genomic islands |
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Int J Med Microbiol 298: 411-428
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Glöckner G, Golderer G, Werner-Felmayer G, Meyer S, Marwan W (2008) |
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A first glimpse at the transcriptome of Physarum polycephalum |
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BMC Genomics 9: 6
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Groth M, Szafranski K, Taudien S, Huse K, Mueller O, Rosenstiel P, Nygren AO, Schreiber S, Birkenmeier G, Platzer M (2008) |
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High-resolution mapping of the 8p23.1 beta-defensin cluster reveals strictly concordant copy number variation of all genes |
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Hum Mutat 29: 1247-1254
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Heidel AJ, Glöckner G (2008) |
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Mitochondrial genome evolution in the social amoebae |
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Mol Biol Evol 25: 1440-1450
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Hiller M, Platzer M (2008) |
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Widespread and subtle: alternative splicing at short-distance tandem sites |
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Trends Genet 24: 246-255
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Hiller M, Szafranski K, Huse K, Backofen R, Platzer M (2008) |
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Selection against tandem splice sites affecting structured protein regions |
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BMC Evol Biol 8: 89
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Hiller M, Szafranski K, Sinha R, Huse K, Nikolajewa S, Rosenstiel P, Schreiber S, Backofen R, Platzer M (2008) |
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Assessing the fraction of short-distance tandem splice sites under purifying selection |
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RNA 14: 1-13
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Hollenbach M, Hintersdorf A, Huse K, Sack U, Bigl M, Groth M, Santel T, Buchold M, Lindner I, Otto A, Sicker D, Schellenberger W, Almendinger J, Pustowoit B, Birkemeyer C, Platzer M, Oerlecke I, Hemdan N, Birkenmeier G (2008) |
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Ethyl pyruvate and ethyl lactate down-regulate the production of pro-inflammatory cytokines and modulate expression of immune receptors |
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Biochem Pharmacol 76: 631-644
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Huber R, Hummert C, Gausmann U, Pohlers D, Koczan D, Guthke R, Kinne RW (2008) |
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Identification of intra-group, inter-individual, and gene-specific variances in mRNA expression profiles in the rheumatoid arthritis synovial membrane |
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Arthritis Res Ther 10: R98
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Huse K, Taudien S, Groth M, Rosenstiel P, Szafranski K, Hiller M, Hampe J, Junker K, Schubert J, Schreiber S, Birkenmeier G, Krawczak M, Platzer M (2008) |
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Genetic Variants of the Copy Number Polymorphic beta-Defensin Locus Are Associated with Sporadic Prostate Cancer |
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Tumour Biol 29: 83-92
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Jastroch M, Withers KW, Taudien S, Frappell PB, Helwig M, Fromme T, Hirschberg V, Heldmaier G, McAllan BM, Firth BT, Burmester T, Platzer M, Klingenspor M (2008) |
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Marsupial uncoupling protein 1 sheds light on the evolution of mammalian nonshivering thermogenesis |
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Physiol Genomics 32: 161-169
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Joseph JM, Fey P, Ramalingam N, Liu XI, Rohlfs M, Noegel AA, Muller-Taubenberger A, Glöckner G, Schleicher M (2008) |
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The actinome of Dictyostelium discoideum in comparison to actins and actin-related proteins from other organisms |
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PLoS ONE 3: e2654
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Kassner N, Huse K, Martin HJ, Godtel-Armbrust U, Metzger A, Meineke I, Brockmoller J, Klein K, Zanger UM, Maser E, Wojnowski L (2008) |
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Carbonyl reductase 1 is a predominant doxorubicin reductase in the human liver |
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Drug Metab Dispos 36: 2113-2120
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Krell A, Beszteri B, Dieckmann G, Glöckner G, Valentin K, Mock T (2008) |
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A new class of ice-binding proteins discovered in a saltstress-induced cDNA library of the psychrophilic diatom Fragilariopsis cylindrus (Bacillariophyceae) |
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Eur J Physiol 43: 423-433
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Muller TD, Reichwald K, Bronner G, Kirschner J, Nguyen TT, Scherag A, Herzog W, Herpertz-Dahlmann B, Lichtner P, Meitinger T, Platzer M, Schafer H, Hebebrand J, Hinney A (2008) |
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Lack of association of genetic variants in genes of the endocannabinoid system with anorexia nervosa |
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Child Adolesc Psychiatry Ment Health 2: 33
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Nau K, Fromme T, Meyer CW, von Praun C, Heldmaier G, Klingenspor M (2008) |
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Brown adipose tissue specific lack of uncoupling protein 3 is associated with impaired cold tolerance and reduced transcript levels of metabolic genes |
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J Comp Physiol B 178: 269-277
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Nguyen T, Ishida K, Jenke-Kodama H, Dittmann E, Gurgui C, Hochmuth T, Taudien S, Platzer M, Hertweck C, Piel J (2008) |
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Exploiting the mosaic structure of trans-acyltransferase polyketide synthases for natural product discovery and pathway dissection |
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Nat Biotechnol 26: 225-233
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Nowack EC, Melkonian M, Glöckner G (2008) |
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Chromatophore genome sequence of Paulinella sheds light on acquisition of photosynthesis by eukaryotes |
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Curr Biol 18: 410-418
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Qiu H, Taudien S, Herlyn H, Schmitz J, Zhou Y, Chen G, Roberto R, Rocchi M, Platzer M, Wojnowski L (2008) |
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CYP3 phylogenomics: evidence for positive selection of CYP3A4 and CYP3A7 |
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Pharmacogenet Genomics 18: 53-66
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Saar K, Beck A, Bihoreau MT, Birney E, Brocklebank D, Chen Y, Cuppen E, Demonchy S, Dopazo J, Flicek P, Foglio M, Fujiyama A, Gut IG, Gauguier D, Guigo R, Guryev V, Heinig M, Hummel O, Jahn N, Klages S, Kren V, Kube M, Kuhl H, Kuramoto T, Kuroki Y, Lechner D, Lee YA, Lopez-Bigas N, Lathrop GM, Mashimo T, Medina I, Mott R, Patone G, Perrier-Cornet JA, Platzer M, Pravenec M, Reinhardt R, Sakaki Y, Schilhabel M, Schulz H, Serikawa T, Shikhagaie M, Tatsumoto S, Taudien S, Toyoda A, Voigt B, Zelenika D, Zimdahl H, Hubner N (2008) |
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SNP and haplotype mapping for genetic analysis in the rat |
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Nat Genet 40: 560-566
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Santel T, Pflug G, Hemdan NY, Schafer A, Hollenbach M, Buchold M, Hintersdorf A, Lindner I, Otto A, Bigl M, Oerlecke I, Hutschenreuter A, Sack U, Huse K, Groth M, Birkemeyer C, Schellenberger W, Gebhardt R, Platzer M, Weiss T, Vijayalakshmi MA, Kruger M, Birkenmeier G (2008) |
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Curcumin inhibits glyoxalase 1: a possible link to its anti-inflammatory and anti-tumor activity |
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PLoS ONE 3: e3508
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Sauermann U, Siddiqui R, Suh YS, Platzer M, Leuchte N, Meyer H, Matz-Rensing K, Stoiber H, Nurnberg P, Hunsmann G, Stahl-Hennig C, Krawczak M (2008) |
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Mhc class I haplotypes associated with survival time in simian immunodeficiency virus (SIV)-infected rhesus macaques |
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Genes Immun 9: 69-80
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Schindler S, Szafranski K, Hiller M, Ali GS, Palusa SG, Backofen R, Platzer M, Reddy AS (2008) |
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Alternative splicing at NAGNAG acceptors in Arabidopsis thaliana SR and SR-related protein-coding genes |
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BMC Genomics 9: 159
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Sinha R, Hiller M, Pudimat R, Gausmann U, Platzer M, Backofen R (2008) |
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Improved identification of conserved cassette exons using Bayesian networks |
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BMC Bioinformatics 9: 477
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Wermter AK, Scherag A, Meyre D, Reichwald K, Durand E, Nguyen TT, Koberwitz K, Lichtner P, Meitinger T, Schafer H, Hinney A, Froguel P, Hebebrand J, Bronner G (2008) |
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Preferential reciprocal transfer of paternal/maternal DLK1 alleles to obese children: first evidence of polar overdominance in humans |
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Eur J Hum Genet 16: 1126-1134
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Ebersberger I, Galgoczy P, Taudien S, Taenzer S, Platzer M, von Haeseler A (2007) |
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Mapping human genetic ancestry |
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Mol Biol Evol 24: 2266-2276
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Fieseler L, Hentschel U, Grozdanov L, Schirmer A, Wen G, Platzer M, Hrvatin S, Butzke D, Zimmermann K, Piel J (2007) |
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Widespread occurrence and genomic context of unusually small polyketide synthase genes in microbial consortia associated with marine sponges |
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Appl Environ Microbiol 73: 2144-2155
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Franke A, Hampe J, Rosenstiel P, Becker C, Wagner F, Hasler R, Little RD, Huse K, Ruether A, Balschun T, Wittig M, Elsharawy A, Mayr G, Albrecht M, Prescott NJ, Onnie CM, Fournier H, Keith T, Radelof U, Platzer M, Mathew CG, Stoll M, Krawczak M, Nurnberg P, Schreiber S (2007) |
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Systematic Association Mapping Identifies NELL1 as a Novel IBD Disease Gene |
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PLoS ONE 2: e691
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Friedel S, Reichwald K, Scherag A, Brumm H, Wermter AK, Fries HR, Koberwitz K, Wabitsch M, Meitinger T, Platzer M, Biebermann H, Hinney A, Hebebrand J (2007) |
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Mutation screen and association studies in the Diacylglycerol O-acyltransferase homolog 2 gene (DGAT2), a positional candidate gene for early onset obesity on chromosome 11q13 |
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BMC Genet 8: 17
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Fromme T, Reichwald K, Platzer M, Li XS, Klingenspor M (2007) |
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Chicken ovalbumin upstream promoter transcription factor II regulates uncoupling protein 3 gene transcription in Phodopus sungorus |
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BMC Mol Biol 8: 1
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Hampe J, Franke A, Rosenstiel P, Till A, Teuber M, Huse K, Albrecht M, Mayr G, De La Vega FM, Briggs J, Gunther S, Prescott NJ, Onnie CM, Hasler R, Sipos B, Folsch UR, Lengauer T, Platzer M, Mathew CG, Krawczak M, Schreiber S (2007) |
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A genome-wide association scan of nonsynonymous SNPs identifies a susceptibility variant for Crohn disease in ATG16L1 |
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Nat Genet 39: 207-211
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Hiller M, Nikolajewa S, Huse K, Szafranski K, Rosenstiel P, Schuster S, Backofen R, Platzer M (2007) |
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TassDB: a database of alternative tandem splice sites |
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Nucleic Acids Res 35: 188-192
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Marin B, Nowack EC, Glöckner G, Melkonian M (2007) |
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The ancestor of the Paulinella chromatophore obtained a carboxysomal operon by horizontal gene transfer from a Nitrococcus-like gamma-proteobacterium |
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BMC Evol Biol 7: 85
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Muller TD, Reichwald K, Wermter AK, Bronner G, Nguyen TT, Friedel S, Koberwitz K, Engeli S, Lichtner P, Meitinger T, Schafer H, Hebebrand J, Hinney A (2007) |
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No evidence for an involvement of variants in the cannabinoid receptor gene (CNR1) in obesity in German children and adolescents |
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Mol Genet Metab 90: 429-434
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Nikolajewa S, Pudimat R, Hiller M, Platzer M, Backofen R (2007) |
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BioBayesNet: a web server for feature extraction and Bayesian network modeling of biological sequence data |
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Nucleic Acids Res 35: 688-693
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Romualdi A, Felder M, Rose D, Gausmann U, Schilhabel M, Glöckner G, Platzer M, Sühnel J (2007) |
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GenColors: Annotation and Comparative Genomics of Prokaryotes made easy |
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In Comparative Genomics. vol. 1. Bergmann, Nicholas H., ed. Pp. ISBN13: 978-1-58829-693-1. Totowa/NJ: Humana Press |
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Rosenstiel P, Huse K, Franke A, Hampe J, Reichwald K, Platzer C, Roberts R, Mathew CG, Platzer M, Schreiber S (2007) |
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Functional characterization of two novel 5' untranslated exons reveals a complex regulation of NOD2 protein expression |
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BMC Genomics 8: 472
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Steinert M, Heuner K, Buchrieser C, Albert-Weissenberger C, Glöckner G (2007) |
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Legionella pathogenicity: genome structure, regulatory networks and the host cell response |
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Int J Med Microbiol 297: 577-587
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Szafranski K, Schindler S, Taudien S, Hiller M, Huse K, Jahn N, Schreiber S, Backofen R, Platzer M (2007) |
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Violating the splicing rules: TG dinucleotides function as alternative 3' splice sites in U2-dependent introns |
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Genome Biol 8: R154
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Taudien S, Ebersberger I, Jahn N, Platzer M (2007) |
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Ist das Schimpansen-Genom sequenziert? |
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Biospektrum 13: 386-388
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Wang HJ, Wermter AK, Nguyen TT, Scherag A, Reichwald K, Waldenmaier B, Lichtner P, Bettecken T, Hebebrand J, Hinney A (2007) |
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No Association of Sequence Variants in the Neuropeptide Y2 Receptor (NPY2R) Gene with Early Onset Obesity in Germans |
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Horm Metab Res 39: 840-844
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Wodniok S, Simon A, Glöckner G, Becker B (2007) |
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Gain and loss of polyadenylation signals during evolution of green algae |
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BMC Evol Biol 7: 65
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Birkenmeier G, Nicklisch S, Pockelt C, Mossie A, Steger V, Glaser C, Hauschildt S, Usbeck E, Huse K, Sack U, Bauer M, Schafer A (2006) |
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Polymyxin B-conjugated alpha 2-macroglobulin as an adjunctive therapy to sepsis: Modes of action and impact on lethality |
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J Pharmacol Exp Ther 318: 762-771
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Elsharawy A, Manaster C, Teuber M, Rosenstiel P, Kwiatkowski R, Huse K, Platzer M, Becker A, Nurnberg P, Schreiber S, Hampe J (2006) |
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SNPSplicer: systematic analysis of SNP-dependent splicing in genotyped cDNAs |
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Hum Mutat 27: 1129-1134
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Glöckner G, Schulte-Spechtel U, Schilhabel M, Felder M, Suehnel J, Wilske B, Platzer M (2006) |
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Comparative genome analysis: Selection pressure on the Borrelia vls cassettes is essential for infectivity |
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BMC Genomics 7: 211
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Glaser C, Birkenmeier G, Schulz S, Huse K (2006) |
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Lipoprotein Receptor-related Protein 1 (LRP1)- one of the Hallmarks of Alzheimer's Disease and other Complex Degenerative Processes |
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In New Research on Alzheimer's Disease. Welsh, E. M., ed. Pp. 99-123. New York: Nova Science Publishers |
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Groth M, Huse K, Reichwald K, Taudien S, Hampe J, Rosenstiel P, Birkenmeier G, Schreiber S, Platzer M (2006) |
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Method for preparing single-stranded DNA templates for Pyrosequencing using vector ligation and universal biotinylated primers |
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Anal Biochem 356: 194-201
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Hiller M, Huse K, Szafranski K, Jahn N, Hampe J, Schreiber S, Backofen R, Platzer M (2006) |
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Single-nucleotide polymorphisms in NAGNAG acceptors are highly predictive for variations of alternative splicing |
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Am J Hum Genet 78: 291-302
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Hiller M, Huse K, Szafranski K, Rosenstiel P, Schreiber S, Backofen R, Platzer M (2006) |
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Phylogenetically widespread alternative splicing at unusual GYNGYN donors |
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Genome Biol 7: R65
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Hiller M, Szafranski K, Backofen R, Platzer M (2006) |
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Alternative Splicing at NAGNAG Acceptors: Simply Noise or Noise and More? |
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PLoS Genet 2: 207-208
pdf
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Hinney A, Bettecken T, Tarnow P, Brumm H, Reichwald K, Lichtner P, Scherag A, Nguyen TT, Schlumberger P, Rief W, Vollmert C, Illig T, Wichmann HE, Schafer H, Platzer M, Biebermann H, Meitinger T, Hebebrand J (2006) |
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Prevalence, spectrum, and functional characterization of melanocortin-4 receptor gene mutations in a representative population-based sample and obese adults from Germany |
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J Clin Endocrinol Metab 91: 1761-1769
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Jeltsch A, Walter J, Reinhardt R, Platzer M (2006) |
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German human methylome project started |
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Cancer Res 66: 7378
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Kersting G, Tzvetkov MV, Huse K, Kulle B, Hafner V, Brockmoller J, Wojnowski L (2006) |
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Topoisomerase II beta expression level correlates with doxorubicin-induced apoptosis in peripheral blood cells |
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Naunyn Schmiedebergs Arch Pharmacol 374: 21-30
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Mock T, Krell A, Glöckner G, Kolukisaoglu U, Valentin K (2006) |
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Cold acclimation-related genes in Fragilaropsis cylindrus |
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Journal of Phycology 42: 78-85
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Nusbaum C, Mikkelsen TS, Zody MC, Asakawa S, Taudien S, Garber M, Kodira CD, Schueler MG, Shimizu A, Whittaker CA, Chang JL, Cuomo CA, Dewar K, FitzGerald MG, Yang X, Allen NR, Anderson S, Asakawa T, Blechschmidt K, Bloom T, Borowsky ML, Butler J, Cook A, Corum B, DeArellano K, DeCaprio D, Dooley KT, Dorris L, 3rd, Engels R, Glöckner G, Hafez N, Hagopian DS, Hall JL, Ishikawa SK, Jaffe DB, Kamat A, Kudoh J, Lehmann R, Lokitsang T, Macdonald P, Major JE, Matthews CD, Mauceli E, Menzel U, Mihalev AH, Minoshima S, Murayama Y, Naylor JW, Nicol R, Nguyen C, O'Leary SB, O'Neill K, Parker SC, Polley A, Raymond CK, Reichwald K, Rodriguez J, Sasaki T, Schilhabel M, Siddiqui R, Smith CL, Sneddon TP, Talamas JA, Tenzin P, Topham K, Venkataraman V, Wen G, Yamazaki S, Young SK, Zeng Q, Zimmer AR, Rosenthal A, Birren BW, Platzer M, Shimizu N, Lander ES (2006) |
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DNA sequence and analysis of human chromosome 8 |
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Nature 439: 331-335
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Platzer M (2006) |
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The human genome and its upcoming dynamics |
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In Genome Dynamics. vol. 2. Volff, J-N, ed. Pp. 1-16. Basel: S. Karger AG |
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Platzer M, Hiller M, Huse K, Szafranski K, Hampe J, Backofen R, Schreiber S (2006) |
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Die Variabilität der Plastizität - Proteinvielfalt durch subtiles alternatives Spleißen an NAGNAG-Motiven |
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GenomXPress 1: 4-6
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Platzer M, Hiller M, Szafranski K, Jahn N, Hampe J, Schreiber S, Backofen R, Huse K (2006) |
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Sequencing errors or SNPs at splice-acceptor guanines in dbSNP? |
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Nat Biotechnol 24: 1068-1070
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Rosenstiel P, Huse K, Till A, Hampe J, Hellmig S, Sina C, Billmann S, von Kampen O, Waetzig GH, Platzer M, Seegert D, Schreiber S (2006) |
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A short isoform of NOD2/CARD15, NOD2-S, is an endogenous inhibitor of NOD2/receptor-interacting protein kinase 2-induced signaling pathways |
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Proc Natl Acad Sci U S A 103: 3280-3285
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Siddiqui RA, Hoischen C, Holst O, Heinze I, Schlott B, Gumpert J, Diekmann S, Grosse F, Platzer M (2006) |
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The analysis of cell division and cell wall synthesis genes reveals mutationally inactivated ftsQ and mraY in a protoplast-type L-form of Escherichia coli |
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FEMS Microbiol Lett 258: 305-311
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Simon A, Glöckner G, Felder M, Melkonian M, Becker B (2006) |
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EST analysis of the scaly green flagellate Mesostigma viride (Streptophyta): Implications for the evolution of green plants (Viridiplantae) |
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BMC Plant Biol 6: 2
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Siol O, Boutliliss M, Chung T, Glöckner G, Dingermann T, Winckler T (2006) |
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Role of RNA Polymerase III Transcription Factors in the Selection of Integration Sites by the Dictyostelium Non-Long Terminal Repeat Retrotransposon TRE5-A |
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Mol Cell Biol 26: 8242-8251
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In Pathogenomics. Dobrindt, U. ; Hacker, J., ed. Pp. 445-456. Wiley-VCH |
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Szafranski K, Jahn N, Platzer M (2006) |
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tuple_plot: fast pairwise nucleotide sequence comparison with noise suppression |
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Bioinformatics 22: 1917-1918
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Taudien S, Ebersberger I, Glöckner G, Platzer M (2006) |
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Should the draft chimpanzee sequence be finished? |
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Trends Genet 22: 122-125
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Winning J, Claus RA, Huse K, Bauer M (2006) |
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Molecular biology on the ICU. From understanding to treating sepsis |
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Minerva Anestesiol 72: 255-267
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Evaluation of AGR2 and AGR3 as candidate genes for inflammatory bowel disease |
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Genes Immun 7: 11-18
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The genome of the social amoeba Dictyostelium discoideum |
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Nature 435: 43-57
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Felder M, Szafranski K, Lehmann R, Eichinger L, Noegel AA, Platzer M, Glöckner G (2005) |
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DictyMOLD-a Dictyostelium discoideum genome browser database |
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Bioinformatics 21: 696-697
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Mutation screen of the brain derived neurotrophic factor gene (BDNF): identification of several genetic variants and association studies in patients with obesity, eating disorders, and attention-deficit/hyperactivity disorder |
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Am J Med Genet B Neuropsychiatr Genet 132: 96-99
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Gemeinsam sind wir stark - was fügt Einzelzellen zu einem Ganzen? |
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GenomXPress 3: 14-15
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Herberth G, Stein A, Glienke J, Taudien S, Klaman I, Herr A, Thierauch KH, Sommer A (2005) |
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Human Latrophilin-2 is Expressed in the Cytotrophoblast and Syncytiotrophoblast of Placenta and in Endothelial Cells |
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Am J Biochemistry and Biotechnology 1: 136-145
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Hermsen M, Snijders A, Guervos MA, Taenzer S, Koerner U, Baak J, Pinkel D, Albertson D, van Diest P, Meijer G, Schrock E (2005) |
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Centromeric chromosomal translocations show tissue-specific differences between squamous cell carcinomas and adenocarcinomas |
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Oncogene 24: 1571-1579
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Hiller M, Huse K, Platzer M, Backofen R (2005) |
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Non-EST based prediction of exon skipping and intron retention events using Pfam information |
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Nucleic Acids Res 33: 5611-5621
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Hiller M, Huse K, Platzer M, Backofen R (2005) |
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Creation and disruption of protein features by alternative splicing -- a novel mechanism to modulate function |
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Genome Biol 6: R58
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Kehrer-Sawatzki H, Sandig C, Chuzhanova N, Goidts V, Szamalek JM, Tänzer S, Muller S, Platzer M, Cooper DN, Hameister H (2005) |
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Breakpoint analysis of the pericentric inversion distinguishing human chromosome 4 from the homologous chromosome in the chimpanzee (Pan troglodytes) |
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Hum Mutat 25: 45-55
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Kehrer-Sawatzki H, Szamalek JM, Tänzer S, Platzer M, Hameister H (2005) |
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Molecular characterization of the pericentric inversion of chimpanzee chromosome 11 homologous to human chromosome 9 |
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Genomics 85: 542-550
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Moche M, Hui DS, Huse K, Chan KS, Choy DK, Scholz GH, Gosse H, Winkler J, Schauer J, Sack U, Hoheisel G (2005) |
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[Matrix Metalloproteinases and their Inhibitors in Lung Cancer with Malignant Pleural Effusion.] |
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Pneumologie 59: 523-528
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Piel J, Butzke D, Fusetani N, Hui D, Platzer M, Wen G, Matsunaga S (2005) |
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Exploring the chemistry of uncultivated bacterial symbionts: antitumor polyketides of the pederin family |
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J Nat Prod 68: 472-479
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Platzer M, Huse K, Hiller M (2005) |
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Alternatives Spleißen an NAGNAG-Motiven: kleine Ursache - große Protein-Vielfalt |
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Biol Unserer Zeit 35: 80-82
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Ramser J, Abidi FE, Burckle CA, Lenski C, Toriello H, Wen G, Lubs HA, Engert S, Stevenson RE, Meindl A, Schwartz CE, Nguyen G (2005) |
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A unique exonic splice enhancer mutation in a family with X-linked mental retardation and epilepsy points to a novel role of the renin receptor |
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Hum Mol Genet 14: 1019-1027
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Romualdi A, Siddiqui R, Glöckner G, Lehmann R, Sühnel J (2005) |
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GenColors: accelerated comparative analysis and annotation of prokaryotic genomes at various stages of completeness |
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Bioinformatics 21: 3669-3671
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The DNA sequence of the human X chromosome |
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Nature 434: 325-337
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Characterization of 8p21.3 chromosomal deletions in B-cell lymphoma: TRAIL-R1 and TRAIL-R2 as candidate dosage-dependent tumor suppressor genes |
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Blood 106: 3214-3222
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Human Galanin (GAL) and Galanin 1 Receptor (GALR1) Variations Are Not Involved in Fat Intake and Early Onset Obesity |
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J Nutr 135: 1387-1392
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Szafranski K, Lehmann R, Parra G, Guigo R, Glöckner G (2005) |
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Gene organization features in A/T-rich organisms |
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J Mol Evol 1 60: 90-98
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Tran T, Hoffmann S, Wiesehan K, Jonas E, Luge C, Aladag A, Willbold D (2005) |
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Insights into human Lck SH3 domain binding specificity: different binding modes of artificial and native ligands |
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Biochemistry 44: 15042-15052
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Valentonyte R, Hampe J, Huse K, Rosenstiel P, Albrecht M, Stenzel A, Nagy M, Gaede KI, Franke A, Haesler R, Koch A, Lengauer T, Seegert D, Reiling N, Ehlers S, Schwinger E, Platzer M, Krawczak M, Muller-Quernheim J, Schurmann M, Schreiber S (2005) |
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Sarcoidosis is associated with a truncating splice site mutation in BTNL2 |
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Nat Genet 37: 357-364
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Wen G, Ramser J, Taudien S, Gausmann U, Blechschmidt K, Frankish A, Ashurst J, Meindl A, Platzer M (2005) |
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Validation of mRNA/EST-based gene predictions in human Xp11.4 revealed differences to the organization of the orthologous mouse locus |
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Mamm Genome 16: 934-941
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Mutation analysis of the MCHR1 gene in human obesity |
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Eur J Endocrinol 152: 851-862
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Wilkins A, Szafranski K, Fraser DJ, Bakthavatsalam D, Muller R, Fisher PR, Glöckner G, Eichinger L, Noegel AA, Insall RH (2005) |
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The Dictyostelium genome encodes numerous RasGEFs with multiple biological roles |
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Genome Biol 6: R68
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Winckler T, Szafranski K, Glöckner G (2005) |
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Transfer RNA gene-targeted integration: an adaptation of retrotransposable elements to survive in the compact Dictyostelium discoideum genome |
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Cytogenet Genome Res 110: 288-298
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Melanocortin-4 receptor gene variant i103 is negatively associated with obesity |
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Am J Hum Genet 74: 572-581
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Gläser C, Schulz S, Handschug K, Huse K, Birkenmeier G (2004) |
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Genetic and functional characteristics of the human in vivo LRP1/A2MR receptor suggested as a risk marker for Alzheimer's disease and other complex (degenerative) diseases |
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Neurosci Res 50: 85-101
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Glöckner G, Lehmann R, Romualdi A, Pradella S, Schulte-Spechtel U, Schilhabel M, Wilske B, Sühnel J, Platzer M (2004) |
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Comparative analysis of the Borrelia garinii genome |
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Nucleic Acids Res 32: 6038-6046
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Hiller M, Huse K, Szafranski K, Jahn N, Hampe J, Schreiber S, Backofen R, Platzer M (2004) |
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Widespread occurrence of alternative splicing at NAGNAG acceptors contributes to proteome plasticity |
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Nat Genet 36: 1255-1257
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Hoyer C, Zander D, Fleischer S, Schilhabel M, Kroener M, Platzer M, Clos J (2004) |
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A Leishmania donovani gene that confers accelerated recovery from stationary phase growth arrest |
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Int J Parasitol 34: 803-811
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International Human Genome Sequencing Consortium (2004) |
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Finishing the euchromatic sequence of the human genome |
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Nature 431: 931-945
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Integrated and sequence-ordered BAC- and YAC-based physical maps for the rat genome |
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Genome Res 14: 766-779
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Lenski C, Abidi F, Meindl A, Gibson A, Platzer M, Frank Kooy R, Lubs HA, Stevenson RE, Ramser J, Schwartz CE (2004) |
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Novel Truncating Mutations in the Polyglutamine Tract Binding Protein 1 Gene (PQBP1) Cause Renpenning Syndrome and X-Linked Mental Retardation in Another Family with Microcephaly |
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Am J Hum Genet 74: 777-780
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Piel J, Hui D, Wen G, Butzke D, Platzer M, Fusetani N, Matsunaga S (2004) |
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Antitumor polyketide biosynthesis by an uncultivated bacterial symbiont of the marine sponge Theonella swinhoei |
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Proc Natl Acad Sci U S A 101: 16222-16227
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Piel J, Wen G, Platzer M, Hui D (2004) |
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Unprecedented Diversity of Catalytic Domains in the First Four Modules of the Putative Pederin Polyketide Synthase |
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ChemBioChem 5: 93-98
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Ramser J, Winnepenninckx B, Lenski C, Errijgers V, Platzer M, Schwartz CE, Meindl A, Kooy RF, Abidi F, Gibson A, Frank Kooy R, Lubs HA, Stevenson RE (2004) |
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A splice site mutation in the methyltransferase gene FTSJ1 in Xp11.23 is associated with non-syndromic mental retardation in a large Belgian family (MRX9) |
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J Med Genet 41: 679-683
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Sinnreich O, Kratzsch J, Reichenbach A, Glaser C, Huse K, Birkenmeier G (2004) |
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Plasma levels of transforming growth factor-1beta and alpha2-macroglobulin before and after radical prostatectomy: association to clinicopathological parameters |
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Prostate 61: 201
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Szafranski K, Dingermann T, Glöckner G, Winckler T (2004) |
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Template jumping by a LINE reverse transcriptase has created a SINE-like 5S rRNA retropseudogene in Dictyostelium |
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Mol Genet Genomics 271: 98-102
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Taudien S, Galgoczy P, Huse K, Reichwald K, Schilhabel M, Szafranski K, Shimizu A, Asakawa S, Frankish A, Loncarevic IF, Shimizu N, Siddiqui R, Platzer M (2004) |
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Polymorphic segmental duplications at 8p23.1 challenge the determination of individual defensin gene repertoires and the assembly of a contiguous human reference sequence |
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BMC Genomics 5: 92
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The International Chimpanzee Chromosome22 Consortium (2004) |
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DNA sequence and comparative analysis of chimpanzee chromosome 22 |
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Nature 429: 382-388
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Utting M, Hampe J, Platzer M, Huse K (2004) |
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Locking of 3' ends of single-stranded DNA templates for improved Pyrosequencing performance |
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BioTechniques 37: 66-73
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Wang HJ, Geller F, Dempfle A, Schauble N, Friedel S, Lichtner P, Fontenla-Horro F, Wudy S, Hagemann S, Gortner L, Huse K, Remschmidt H, Bettecken T, Meitinger T, Schafer H, Hebebrand J, Hinney A (2004) |
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Ghrelin receptor gene: identification of several sequence variants in extremely obese children and adolescents, healthy normal-weight and underweight students, and children with short normal stature |
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J Clin Endocrinol Metab 89: 157-162
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Birkenmeier G, Muller R, Huse K, Forberg J, Glaser C, Hedrich H, Nicklisch S, Reichenbach A (2003) |
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Human alpha2-macroglobulin: genotype-phenotype relation |
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Exp Neurol 184: 153-161
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Brenner S, Prösch S, Schenke-Layland K, Riese U, Gausmann U, Platzer C (2003) |
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cAMP-induced Interleukin-10 promoter activation depends on CCAAT/enhancer-binding protein expression and monocytic differentiation. |
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J Biol Chem 278: 5597-5604
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Croucher PJ, Mascheretti S, Hampe J, Huse K, Frenzel H, Stoll M, Lu T, Nikolaus S, Yang SK, Krawczak M, Kim WH, Schreiber S (2003) |
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Haplotype structure and association to Crohn's disease of CARD15 mutations in two ethnically divergent populations. |
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Eur J Hum Genet 11: 6-16
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Demirci FY, Ramser J, White NJ, Rigatti BW, Meindl A, Lewis KF, Wen G, Gorin MB (2003) |
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Refinement of the physical location and the genomic characterization of the CRSP2 (EXLM1) gene on Xp11.4 |
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DNA Seq 14: 123-127
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Hettmann T, Siddiqui RA, von Langen J, Frey C, Romao MJ, Diekmann S (2003) |
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Mutagenesis study on the role of a lysine residue highly conserved in formate dehydrogenases and periplasmic nitrate reductases |
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Biochem Biophys Res Commun 310: 40-47
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Junker K, Boerner D, Schulze W, Utting M, Schubert J, Werner W (2003) |
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Analysis of genetic alterations in normal bladder urothelium |
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Urology 62: 1134-1138
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Kollmar M, Glöckner G (2003) |
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Identification and phylogenetic analysis of Dictyostelium discoideum kinesin proteins |
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BMC Genomics 4: 47
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Sakaki Y, Watanabe H, Taylor T, Hattori M, Fujiyama A, Toyoda A, Kuroki Y, Itoh T, Saitou N, Oota S, Kim CG, Kitano T, Lehrach H, Yaspo ML, Sudbrak R, Kahla A, Reinhardt R, Kube M, Platzer M, Taenzer S, Galgoczy P, Kel A, Bloecker H, Scharfe M, Nordsiek G, Hellmann I, Khaitovich P, Paabo S, Chen Z, Wang SY, Ren SX, Zhang XL, Zheng HJ, Zhu GF, Wang BF, Zhao GP, Tsai SF, Wu K, Liu TT, Hsiao KJ, Park HS, Lee YS, Cheong JE, Choi SH (2003) |
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Human versus chimpanzee chromosome-wide sequence comparison and its evolutionary implication |
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Cold Spring Harb Symp Quant Biol 68: 455-460
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Anjard C, The Dictyostelium Sequencing Consortium, Loomis WF (2002) |
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Evolutionary Analysis of ABC Transporters of Dictyostelium discoideum |
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Eukaryot Cell 1: 643-652
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Physical and transcriptional map of the critical region for keratolytic winter erythema (KWE) on hromosome 8p22-p23 between D8S550 and D8S1759 Association of familial and sporadic rheumatoid arthritis with a single corticotropin-releasing hormone genomic region (8q12.3) haplotype |
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Eur J Hum Genet 10: 17-25
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Blöcker H, Lehrach H, Platzer M (2002) |
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Disease gene-oriented genomics sequence analysis of medically important regions of the human genome and homologous regions of the mouse genome |
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DHGP Progress Report : 42-43
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Copley LM, Zhao WD, Kopacz K, Herman GE, Kioschis P, Poustka A, Taudien S, Platzer M (2002) |
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Exclusion of mutations in the MTMR1 gene as a frequent cause of X- linked myotubular myopathy |
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Am J Med Genet 107: 256-258
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Dame G, Glöckner G, Beck CF (2002) |
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Knock-out of a putative transporter results in altered blue-light signalling in Chlamydomonas |
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Plant Cell Physiol 31: 577-587
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Demirci FY, Rigatti BW, Wen G, Radak AL, Mah TS, Baic CL, Traboulsi EI, Alitalo T, Ramser J, Gorin MB (2002) |
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X-linked cone-rod dystrophy (locus COD1): identification of mutations in RPGR exon ORF15 |
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Am J Hum Genet 70: 1049-53
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Deutscher K, Deutscher J, Bergmann L, Tefs K, Reichwald K, Schuster V (2002) |
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Clinical and molecular genetic findings in four girls with Rett syndrome] |
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Klin Padiatr 214: 291-294
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Fife M, Steer S, Fisher S, Newton J, McKay K, Worthington J, Shah C, Polley A, Rosenthal A, Ollier W, Lewis C, Wordsworth P, Lanchbury J (2002) |
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Association of familial and sporadic rheumatoid arthritis with a single corticotropin-releasing hormone genomic region (8q12.3) haplotype |
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Arthritis Rheum 46: 75-82
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Frenzel H, Hampe J, Huse K, Mascheretti SM, Croucher PP, Lynch NJ, Siebert R, Platzer M, Schreiber S (2002) |
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Mutation detection and physical mapping of the CD11gene cluster in association with inflammatory bowel disease |
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Immunogenetics 53: 835-842
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Fuchs S, Resch K, Thiel C, Ulbrich M, Platzer M, Jockusch H, Schmitt-John T (2002) |
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Comparative transcription map of the wobbler critical region on mouse chromosome 11 and the homologous region on human chromosome 2p13-14 |
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BMC Genet 3: 14
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Glöckner G, Eichinger L, Szafranski K, Pachebat JA, Bankier AT, Dear PH, Lehmann R, Baumgart C, Parra G, Abril JF, Guigo R, Kumpf K, Tunggal B, Cox E, Quail MA, Platzer M, Rosenthal A, Noegel AA, Consortium DGS (2002) |
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Sequence and analysis of chromosome 2 of Dictyostelium discoideum |
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Nature 418: 79-85
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Hampe J, Frenzel H, Mirza MM, Croucher PJ, Cuthbert A, Mascheretti S, Huse K, Platzer M, Bridger S, Meyer B, Nurnberg P, Stokkers P, Krawczak M, Mathew CG, Curran M, Schreiber S (2002) |
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Evidence for a NOD2-independent susceptibility locus for inflammatory bowel disease on chromosome 16p |
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Proc Natl Acad Sci U S A 99: 321-326
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Huse K, Bohme HJ, Scholz GH (2002) |
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Purification of antibodies by affinity chromatography |
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J Biochem Biophys Methods 51: 217-231
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Kehrer-Sawatzki H, Schreiner B, Tänzer S, Platzer M, Muller S, Hameister H (2002) |
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Molecular characterization of the pericentric inversion that causes differences between chimpanzee chromosome 19 and human chromosome 17 |
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Am J Hum Genet 71: 375-388
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Neumann S, Huse K, Semrau R, Diegeler A, Gebhardt R, Buniatian GH, Scholz GH (2002) |
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Aldosterone and d-glucose stimulate the proliferation of human cardiac myofibroblasts in vitro |
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Hypertension 39: 756-760
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Oksche A, Leder G, Valet S, Platzer M, Hasse K, Geist S, Krause G, Rosenthal A, Rosenthal W (2002) |
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Variant amino acids in the extracellular loops of murine and human vasopressin v2 receptors account for differences in cell surface expression and ligand affinity |
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Mol Endocrinol 16: 799-813
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Schmitt-John T, Platzer M (2002) |
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Functional analysis of a gene-rich region of human chromosome 8 by comparative sequence analysis and targeted mutagenesis of the mouse |
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Winckler T, Dingermann T, Glöckner G (2002) |
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Dictyostelium mobile elements: strategies to amplify in a compact genome. |
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Cell Mol Life Sci 59: 2097-2111
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Appel S, Reichwald K, Zimmermann W, Reis A, Rosenthal A, Hennies HC (2001) |
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Identification and localization of a new human myotubularin-related protein gene, mtmr8, on 8p22-p23 |
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Genomics 75: 6-8
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Aradhya S, Bardaro T, Galgoczy P, Yamagata T, Esposito T, Patlan H, Ciccodicola A, Munnich A, Kenwrick S, Platzer M, D'Urso M, Nelson DL (2001) |
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Multiple pathogenic and benign genomic rearrangements occur at a 35 kb duplication involving the NEMO and LAGE2 genes |
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Hum Mol Genet 10: 2557-2567
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Bourdon V, Philippe C, Grandemenge A, Reichwald K, Jonveaux P (2001) |
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Deletion screening by fluorescence in situ hybridization in Rett syndrome patients |
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Ann Genet 44: 191-194
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Dry K, Kenwrick S, Rosenthal A, Platzer M (2001) |
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The complete sequence of the human locus for NgCAM-related cell adhesion molecule reveals a novel alternative exon in chick and man and conserved genomic organization for the L1 subfamily |
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Gene 273: 115-122
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Eichinger L, Noegel AA, Glöckner G (2001) |
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Das Dictyostelium discoideum-Genomprojekt |
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Biospektrum 7: 229-231
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Galgoczy P, Rosenthal A, Platzer M (2001) |
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Human-mouse comparative sequence analysis of the NEMO gene reveals an alternative promoter within the neighboring G6PD gene |
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Gene 271: 93-98
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Glöckner G, Szafranski K, Winckler T, Dingermann T, Quail MA, Cox E, Eichinger L, Noegel AA, Rosenthal A (2001) |
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The Complex Repeats of Dictyostelium discoideum |
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Genome Res 11: 585-594
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Grunau C, Renault E, Rosenthal A, Roizes G (2001) |
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MethDB - a public database for DNA methylation data |
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Nucleic Acids Res 29: 270-274
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Hoheisel G, Sack U, Hui DS, Huse K, Chan KS, Chan KK, Hartwig K, Schuster E, Scholz GH, Schauer J (2001) |
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Occurrence of matrix metalloproteinases and tissue inhibitors of metalloproteinases in tuberculous pleuritis |
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Tuberculosis 81: 203-209
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Hoyer C, Mellenthin K, Schilhabel M, Platzer M, Clos J (2001) |
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Use of genetic complementation to identify gene(s) which specify species-specific organ tropism of Leishmania |
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Med Microbiol Immunol (Berl) 190: 43-46
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International Human Genome Sequencing Consortium, ..., Rosenthal A, Platzer M, Nyakatura G, Taudien S, Rump A, ... (2001) |
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Initial sequencing and analysis of the human genome |
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Nature 409: 860-921
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Levanon D, Glusman G, Bangsow T, Ben-Asher E, Male DA, Avidan N, Bangsow C, Hattori M, Taylor TD, Taudien S, Blechschmidt K, Shimizu N, Rosenthal A, Sakaki Y, Lancet D, Groner Y (2001) |
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Architecture and anatomy of the genomic locus encoding the human leukemia-associated transcription factor RUNX1/AML1 |
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Gene 262: 23-33
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Peng Jia H, Schutte BC, Schudy A, Linzmeier R, Guthmiller JM, Johnson GK, Tack BF, Mitros JP, Rosenthal A, Ganz T, McCray PB (2001) |
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Discovery of new human beta-defensins using a genomics-based approach |
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Gene 263: 211-218
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Perret X, Parsons J, Viprey V, Reichwald K, Broughton WJ (2001) |
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Séquences répétées des genomes de Rhizobium sp.NGR234 et Sinorhibozobium meliloti: une analyse comparative par séquencage aléatoire |
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Can J Microbiol 47: 548-558
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Platzer M, Glöckner G, Rump A, Taudien S, Schilhabel M, Rosenthal A (2001) |
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Die Genomanalyse am IMB Jena |
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Biospektrum 3 7: 262-264
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Rivero F, Dislich H, Glöckner G, Noegel AA (2001) |
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The Dictyostelium discoideum family of Rho-related preteins |
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Nucleic Acids Res 29: 1068-1079
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Rump A, Kasper G, Hayes C, Wen G, Starke H, Liehr T, Lehmann R, Lagemann D, Rosenthal A (2001) |
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Complex Arrangements of Genes within a 220-kb Region of Double-Duplicated DNA on Human 2q37.1 |
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Genomics 73: 50-55
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Stoyan T, Glöckner G, Diekmann S, Carbon J (2001) |
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Multifunctional centromere binding factor 1 is essential for chromosome segregation in the human pathogenic yeast Candida glabrata |
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Mol Cell Biol 21: 4875-4888
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The International Human Genome Mapping Consortium, Rosenthal A, Wen G, Schilhabel M, Glöckner G, Nyakatura G, Siebert R, Schlegelberger B (2001) |
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A physical map of the human genome |
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Nature 409: 934-941
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Zimmermann W, Broll H, Ehlers B, Buhk HJ, Rosenthal A, Goltz M (2001) |
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Genome sequence of bovine herpesvirus 4, a bovine Rhadinovirus, and identification of an origin of DNA replication |
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J Virology 75: 1186-1194
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Calmont A, Reichwald K, Ronco P, Rossert J (2000) |
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Identification of a short cis-acting element in the human vasopressin type 2 receptor gene which confers high-level expression of a reporter gene specifically in collecting duct cells |
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Mol Endocrinol 14: 1682-95
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Chandler D, Angelicheva D, Heather L, Gooding R, Gresham D, Yanakiev P, de Jonge R, Baas F, Dye D, Karagyozov L, Savov A, Blechschmidt K, Keats B, Thomas PK, King RH, Starr A, Nikolova A, Colomer J, Ishpekova B, Tournev I, Andoni Urtizberea J, Merlini L, Butinar D, Chabrol B, Voit T, Baethmann M, Nedkova V, Corches A, Kalaydjieva L (2000) |
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Hereditary motor and sensory neuropathy - Lom (HMSNL): refined genetic mapping in Romani (Gypsy) families from several European countries |
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Neuromuscul. Disord. 10: 584-591
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Glöckner G (2000) |
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Large Scale Sequencing and Analysis of AT Rich Eukaryote Genomes |
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Current Genomics I: 289-299
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Glöckner G, Momeni P, Schmidt O, von Holtum D, Albrecht B, Gillessen-Kaesbach G, Hennekam R, Meinecke P, Zabel B, Rosenthal A, Horsthemke B, Ludecke HJ (2000) |
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Mutations in a new gene, encoding a zinc-finger protein, cause tricho- rhino-phalangeal syndrome type I |
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Nat Genet 24: 71-74
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Glöckner G, Rosenthal A, Valentin K (2000) |
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The structure and gene repertoire of an ancient red algal plastid genome |
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J Mol Evol 51: 382-390
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Glienke J, Schmitt A, Pilarsky C, Hinzmann B, Weiß B, Rosenthal A, Thierauch K-H (2000) |
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Differential gene expression by endothelial cells in distinct angiogenic states. |
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Eur J Biochem 267: 2820-2830
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Glusman G, Sosinsky A, Ben-Asher E, Avidan N, Sonkin D, Bahar A, Rosenthal A, Clifton S, Roe B, Ferraz C, Demaille J, Lancet D (2000) |
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Sequence, structure and evolution of a complete human olfactory receptor gene cluster |
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Genomics 63: 227-245
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Grunau C, Hindermann W, Rosenthal A (2000) |
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Large-scale methylation analysis of human genomic DNA reveals tissue-specific differences between the methylation profiles of genes and pseudogenes |
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Hum Mol Genet 9: 2651-2663
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Grunau C, Schattevoy, R., Mache, N., Rosenthal, A. (2000) |
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MethTools - a toolbox to visualize and analyze DNA mehtylation data |
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Nucleic Acids Res 28: 1053-1058
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Hattori M, Fujiyama A, Taylor D, Watanabe H, Yada T, Park H-S, Toyoda A, Ishii K, Totoki Y, Choi D-K, E. S, Ohki M, Takagi T, Sakaki Y, Taudien S, Blechschmidt K, Polley A, Menzel U, Delabar J, Kumpf K, Lehmann R, Patterson D, Reichwald K, Rump A, Schilhabel M, Schudy A, Zimmermann W, Rosenthal A, Kudoh J, Shibuya K, Kawasaki K, Aakawa S, Shintani A, Sasaki T, Nagamine, Mitsuyama S, Antonarakis SE, Minoshima S, Shimizu N, Nordsiek G, Hornischer K, Brandt P, Scharfe M, Schön O, Desario A, Reichelt J, Kauer G, Blöcker H, Ramser J, Beck A, Klages S, Hennig S, Riesselmann L, Dagand E, Wehrmeyer S, Borzym K, Gardiner K, Nizetic D, Francis F, Lehrach H, Reinhardt R, Yaspo M-L (2000) |
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The DNA sequence of human chromosome 21 |
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Nature 405: 311-328
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Kalaydjieva L, Gresham D, Gooding R, Heather L, Baas F, de Jonge R, Blechschmidt K, Angelicheva D, Chandler D, Worsley P, Rosenthal A, King RH, Thomas PK (2000) |
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N-myc downstream-regulated gene 1 is mutated in hereditary motor and sensory neuropathy-Lom |
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Am J Hum Genet 67: 47-58
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Orti R, Rachidi M, Vialard F, Toyama K, Lopes C, Taudien S, Rosenthal A, Yaspo ML, Sinet P, Delabar JM (2000) |
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Characterization of a Novel Gene, C21orf6, Mapping to a Critical Region of Chromosome 21q22.1 Involved in the Monosomy 21 Phenotype and of Its Murine Ortholog, orf5 |
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Genomics 64: 203-210
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Platzer M, Mallon A, Bate R, Glöckner G, Botcherby MR, Nordsiek G, Strivens MA, Kioschis P, Dangel A, Cunningham D, Straw RN, Weston P, Gilbert M, Fernando S, Goodall K, Hunter G, Greystrong JS, Clarke D, Kimberley C, Goerdes M, Blechschmidt K, Rump A, Hinzmann B, Mundy CR, Miller W, Poustka A, Herman GE, Rhodes M, Denny P, Rosenthal A, Brown SD, Erstautorenschaft g (2000) |
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Comparative Genome Sequence Analysis of the Bpa/Str Region in Mouse and Man |
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Genome Res 10: 758-775
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Reichwald K, Thiesen J, Wiehe T, Weitzel J, Poustka WA, Rosenthal A, Platzer M (2000) |
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Comparative sequence analysis of the MECP2-locus in human and mouse reveals new transcribed regions |
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Mamm Genome 11: 182-190
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Schiebel K, Meder J, Rump A, Rosenthal A, Winkelmann M, Fischer C, Bonk T, Humeny A, Rappold G (2000) |
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Elevated DNA sequence diversity in the genomic region of the phosphatase PPP2R3L gene in the human pseudoautosomal region |
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Cytogenet Cell Genet 91: 224-230
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Slavov D, Hattori M, Sakaki Y, Rosenthal A, Shimizu N, Minoshima S, Kudoh J, Yaspo M, Ramser J, Reinhardt R, Reimer C, Clancy K, Rynditch A, Gardiner K (2000) |
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Criteria for gene identification and features of genome organization: analysis of 6.5 Mb of DNA sequence from human chromosome 21 |
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Gene 247: 215-232
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Taudien S, Rump A, Platzer M, Drescher B, Schattevoy R, Glöckner G, Dette M, Baumgart C, Weber J, Menzel U, Rosenthal A (2000) |
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RUMMAGE - a high throughput sequence annotation system |
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Trends Genet 16: 519-521
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Tunnicliffe GR, Glöckner G, Elgar GS, Brenner S, Rosenthal A (2000) |
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Comparative analysis of the PCOLCE region in Fugu rubripes using a new automated annotation tool |
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Mamm Genome 11: 213-219
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Viprey V, Rosenthal A, Broughton WJ, Perret X (2000) |
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Genetic snapshots of the Rhizobium species NGR234 genome |
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Genome Biol 1
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Wiehe T, Mountain J, Parham P, Slatkin M (2000) |
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Distinguishing recombination and intragenic gene conversion by linkage disequilibrium patters |
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Genet Res 75: 61-73
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Zuber J, Tchernitsa OI, Hinzmann B, Schmitz AC, Grips M, Hellriegel M, Sers C, Rosenthal A, Schafer R (2000) |
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A genome-wide survey of RAS transformation targets |
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Nat Genet 24: 144-152
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Blechschmidt K, Schweiger M, Wertz K, Christensen H-M, Rosenthal A, Lehrach H, Yaspo M-L (1999) |
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The Mouse AIRE Gene: Comparative Genomic Sequencing, Gene Organization and Expression |
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Genome Res 9: 158-166
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Oppitz U, Bernthaler U, Schindler D, Höhn H, Platzer M, Rosenthal A, Flentje M (1999) |
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Mutationsanalyse des ATM-Gens bei Tumorpatienten mit schweren Bestrahlungsnebenwirkungen |
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In medgenetik,Sonderheft "Ataxia telangiectatica". Stuhrmann, M.; Dörk, T.; Karstens, J. H., ed. Pp. 60-63. München: |
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Oppitz U, Bernthaler, U., Schindler, D., Sobeck, A., Hoen, H., Platzer, M., Rosenthal, A., Flentje, M. (1999) |
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Sequence analysis of the ATM gene in 20 patients with RTOG grade 3 or 4 acute and/or late tissue radiation side effects |
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Int I Radiat Oncol Biol Phys 44: 981-988
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Perret X, Freiberg C, Rosenthal A, Broughton WJ (1999) |
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Physical and genetic organisation of pNGR234a |
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Highlights of Nitrogen Fixation Research : 157-161
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Perret X, Freiberg C, Rosenthal A, Broughton WJ, Fellay R (1999) |
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High resolution transciptional analysis of the symbiotic plasmid of Rhizobium sp. NGR234 |
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Mol Microbiol 32: 415-425
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Pilarsky CP, Schmitt AO, Dahl E, Rosenthal A (1999) |
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Microarrays - chances and challenges |
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Current opinion in molecular therapeutics 6 1: 17-19
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Platzer M, Wiehe T, Rohde K, Sandoval N, Rosenthal A (1999) |
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Die genomische Struktur des ATM-Genes und Hinweise auf die Möglichkeit umfangreicher Deletionen |
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In medgenetik Sonderheft MedGen "Ataxia telangiectatica". Stuhrmann, M.; Dörk, T.; Karstens, J. H., ed. |
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Rohde A, Grunau C, De Beck L, Van Montagu M, Rosenthal A, Boerjan W (1999) |
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Carpel, a new Arabidopsis epi-mutant of the SUPERMAN gene: phenotypic analysis and DNA methylation status |
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Plant Cell Physiol 40: 961-972
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Rosenthal A (1999) |
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Das Humangenomprojekt und seine Bedeutung für die Medizin im 21. Jahrhundert |
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In Gentechnik Grenzzone menschlichen Handelns?. Karlsruhe: Verlag Versicherungswirtschaft GmbH |
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Sandoval N, Platzer M, Rosenthal A, Dörk T, Bendix R, Skawran B, Stuhrmann M, Wegner R-D, Sperling K, Banin S, Shiloh J, Baumer A, Bernthaler U, Sennefelder H, Brohm M, Weber B, Schindler D (1999) |
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Sequenzanalyse des ATM-Gens bei Patienten mit AT |
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Stuhrmann, M.; Dörk, T.; Karstens, J. H., ed. Pp. 20-21. München: medgenetik,Sonderheft "Ataxia telangiectatica" |
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Sandoval N, Platzer M, Rosenthal A, Dork T, Bendix R, Skawran B, Stuhrmann M, Wegner R, Sperling K, Banin S, Shiloh Y, Baumer A, Bernthaler U, Sennefelder H, Brohm M, Weber B, Schindler D (1999) |
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Characterization of ATM gene mutations in 66 ataxia telangiectasia families |
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Hum Mol Genet 8: 69-79
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Schmitt AO, Specht T, Beckmann G, Dahl E, Pilarsky CP, Hinzmann B, Rosenthal A (1999) |
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Exhaustive mining of EST libraries for genes differentially expressed in normal and tumour tissues |
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Nucleic Acids Res 27: 4251-4260
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Schmitt-John T, Platzer M, Jokusch H (1999) |
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Vergleichende Genomanalyse als Werkzeug für die Positionsklonierung |
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Biospektrum 5/99: 390-397
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Schreuer O, Matysiak S, Panke G, Frank R, Taudien S, Rosenthal A, Gausepohl H (1999) |
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Development of an Automated System for the Multiple Parallel Production of Synthetic Oligonucleotides |
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Innovation and Perspectives in Solid Phase Synthesis & Combinatorial Libraries : 387-390
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Striebel H-M, Kalousek F (1999) |
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Eukaryotic precursor proteins are processed by Escherichia coli outer membrane protein OmpP. |
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Eur J Biochem 262: 832-839
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Szafranski K, Glöckner G, Dingermann T, Dannat K, Noegel AA, Eichinger L, Rosenthal A, Winckler T (1999) |
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Non-LTR retrotransposons with unique integration preferences downstream of Dictyostelium discoideum tRNA genes |
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Mol Gen Genet 262: 772-780
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Zhang Q, Siebert R, Yan M, Hinzmann B, Cui X, Xue L, Rakestraw KM, Naeve CW, Beckmann G, Weisenburger DD, Sanger WG, Nowotny H, Vesely M, Callet-Bauchu E, Salles G, Dixit VM, Rosenthal A, Schlegelberger B, Morris SW (1999) |
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Inactivating mutations and overexpression of BCL10, a caspase recruitment domain-containing gene, in MALT lymphoma with t(1;14)(p22;q32) |
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Nat Genet 22: 63-68
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Zhang Z, Berman P, Wiehe T, Miller W (1999) |
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Post-processing long pairwise alignments |
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Bioinformatics 15: 1012-1019
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Brandau O, Nyakatura G, Jedele KB, Platzer M, Achatz H, Ross M, Murken J, Rosenthal A, Meindl A (1998) |
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UHX1 and PCTK1: precise characterisation and localisation within a gene- rich region in Xp11.23 and evaluation as candidate genes for retinal diseases mapped to Xp21.1-p11.2 |
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Eur J Hum Genet 6: 459-466
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Coutelle O, Nyakatura G, Taudien S, Elgar G, Brenner S, Platzer M, Drescher B, Jouet M, Kenwrick S, Rosenthal A (1998) |
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The neural cell adhesion molecule L1: genomic organisation and differential splicing is conserved between man and the pufferfish Fugu |
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Gene 208: 7-15
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Fellay R, Hanin M, Montorzi G, Frey J, Freiberg C, Golinowski W, Staehelin C, Broughton WJ, Jabbouri S (1998) |
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nodD2 of Rhizobium sp. NGR234 is involved in the repression of the nodABC operon |
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Mol Microbiol 27: 1039-1050
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Glöckner G, Scherer S, Schattevoy R, Boright A, Weber J, Tsui L-C, Rosenthal A (1998) |
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Large-Scale Sequencing of Two Regions in Human Chromosome 7q22: Analysis of 650 kb of Genomic Sequence around the EPO and CUTL1 Loci Revals 17 Genes |
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Genome Res 8: 1060-1073
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Mishmar D, Rahat A, Scherer SW, Nyakatura G, Hinzmann B, Kohwi Y, Mandel-Gutfroind Y, Lee JR, Drescher B, Sas DE, Margalit H, Platzer M, Weiss A, Tsui LC, Rosenthal A, Kerem B (1998) |
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Molecular characterization of a common fragile site (FRA7H) on human chromosome 7 by the cloning of a simian virus 40 integration site |
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Proc Natl Acad Sci U S A 95: 8141-8146
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Ohkuma M, Ohtoko K, Grunau C, Kudo T (1998) |
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Phylogenetic identification of the symbiontic hypermastigote Trichonympha agilis in the hindgut of the termite Reticulitermes speratus based on small subunit rRNA sequence |
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J Eukaryot Microbiol 45: 439-444
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Rosenthal A, Platzer M, Nyakatura G, Jouet M (1998) |
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Template Amplification |
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In ICRF Handbook of Genome analysis. vol. 2. Spurr, N.K.; Young, B.D.; Breyant, S.P., ed. Pp. 529-556. Oxford: Blackwell Scientific Ltd. |
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Schwahn U, Lenzner S, Dong J, Feil S, Hinzmann B, van Duijnhoven G, Kirschner R, Hemberger M, Bergen AA, Rosenberg T, Pinckers AJ, Fundele R, Rosenthal A, Cremers FP, Ropers HH, Berger W (1998) |
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Positional cloning of the gene for X-linked retinitis pigmentosa 2 |
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Nat Genet 19: 327-332
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Slatkin M, Wiehe T (1998) |
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Genetic hitch-hiking in a subdivided population |
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Genet Res 71: 155-160
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Strom TM, Nyakatura G, Apfelstedt-Sylla E, Hellebrand H, Lorenz B, Weber BH, Wutz K, Gutwillinger N, Ruther K, Drescher B, Sauer C, Zrenner E, Meitinger T, Rosenthal A, Meindl A (1998) |
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An L-type calcium-channel gene mutated in incomplete X-linked congenital stationary night blindness |
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Nat Genet 19: 260-263
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Taudien S, Platzer M, Kioschis P, Wiemann S, Heiss NS, Francis F, Götz C, Poustka A, Wiehe T, Beckmann G, Weber J, Nordsiek G, Rosenthal A (1998) |
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Genomic organization of a 225-kb region in Xq28 containing the gene for X-linked myotubular myopathy (MTM1) and a related gene (MTMR1) |
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Genomics 54: 256-266
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Varon R, Vissinga C, Platzer M, Cerosaletti KM, Chrzanowska KH, Saar K, Beckmann G, Seemanova E, Cooper PR, Nowak NJ, Stumm M, Weemaes CM, Gatti RA, Wilson RK, Digweed M, Rosenthal A, Sperling K, Concannon P, Reis A (1998) |
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Nibrin, a novel DNA double-strand break repair protein, is mutated in Nijmegen breakage syndrome |
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Cell 93: 467-476
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Wiehe T (1998) |
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The effect of selective sweeps on the variance of the allele distribution of a linked multiallele locus: Hitchhiking of microsatellites |
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Theor Popul Biol 53: 272-283
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Wiehe T, Slatkin M (1998) |
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Epistatic selection in a multi-locus Levene model and implications for linkage disequilibrium |
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Theor Popul Biol 53: 75-84
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Baake E, Wiehe T (1997) |
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Bifurcations in haploid and diploid sequence space models |
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Journal of Mathematical Biology 35: 321-343
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Brenner V, Nyakatura G, Rosenthal A, Platzer M (1997) |
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Genomic organization of two novel genes on human Xq28: compact head to head arrangement of IDH gamma and TRAP delta is conserved in rat and mouse |
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Genomics 44: 8-14
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Freiberg C, Fellay R, Bairoch A, Broughton WJ, Rosenthal A, Perret X (1997) |
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Molecular basis of symbiosis between Rhizobium and legumes |
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Nature 387: 394-401
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Glöckner G, Beck CF (1997) |
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Cloning and characterization of LRG5, a gene involved in blue light signaling in Chlamydomonas gametogenesis |
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Plant J 12: 677-83
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Hanin M, Jabbouri S, Quesada-Vincens D, Freiberg C, Perret X, Prome JC, Broughton WJ, Fellay R (1997) |
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Sulphation of Rhizobium sp. NGR234 Nod factors is dependent on noeE, a new host-specificity gene |
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Mol Microbiol 24: 1119-1129
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Heiss NS, Glöckner G, Bachner D, Kioschis P, Klauck SM, Hinzmann B, Rosenthal A, Herman GE, Poustka A (1997) |
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Genomic structure of a novel LIM domain gene (ZNF185) in Xq28 and comparisons with the orthologous murine transcript |
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Genomics 43: 329-338
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Knöll A, Schunkert H, Reichwald K, Danser AH, Bauer D, Platzer M, Stein G, Rosenthal A (1997) |
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Human renin binding protein: complete genomic sequence and association of an intronic T/C polymorphism with the prorenin level in males |
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Hum Mol Genet 6: 1527-1534
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Perret X, Viprey V, Freiberg C, Broughton WJ (1997) |
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Structure and evolution of NGRRS-1, a complex, repeated element in the genome of Rhizobium sp. strain NGR234 |
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J Bacteriol 179: 7488-7496
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Platzer M, Rotman G, Bauer D, Uziel T, Savitsky K, Bar-Shira A, Gilad S, Shiloh Y, Rosenthal A (1997) |
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Ataxia-telangiectasia locus: sequence analysis of 184 kb of human genomic DNA containing the entire ATM gene |
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Genome Res 7: 592-605
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Rao E, Weiss B, Fukami M, Rump A, Niesler B, Mertz A, Muroya K, Binder G, Kirsch S, Winkelmann M, Nordsiek G, Heinrich U, Breuning MH, Ranke MB, Rosenthal A, Ogata T, Rappold GA (1997) |
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Pseudoautosomal deletions encompassing a novel homeobox gene cause growth failure in idiopathic short stature and Turner syndrome |
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Nat Genet 16: 54-63
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Rosenthal A, Taudien S (1997) |
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Genomische DNA-Sequenzierung: Herausforderung zwischen Grundlagenforschung und "Datenfabrik" |
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Bioforum 1997 20: 604-607
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Savitsky K, Platzer M, Uziel T, Gilad S, Sartiel A, Rosenthal A, Elroy-Stein O, Shiloh Y, Rotman G (1997) |
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Ataxia-telangiectasia: structural diversity of untranslated sequences suggests complex post-transcriptional regulation of ATM gene expression |
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Nucleic Acids Res 25: 1678-1684
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Wiehe T (1997) |
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Model dependency of error thresholds: The role of fitness functions and contrasts of the finite and infinite site models |
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Genetical Research Cambridge 67: 127-136
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Drescher B, Spiess E, Schachner M, Probstmeier R (1996) |
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Structural analysis of the murine cell adhesion molecule L1 by electron microscopy and computer-assisted modelling |
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Eur J Neurosci 8: 2467-2478
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Freiberg C, Perret X, Broughton WJ, Rosenthal A (1996) |
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Sequencing the 500-kb GC-rich symbiotic replicon of Rhizobium sp. NGR234 using dye terminators and a thermostable "sequenase": a beginning |
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Genome Res 6: 590-600
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Jabbouri S, Hanin M, Fellay R, Quesada-Vincens D, Reuhs B, Carlson RW, Perret X, Freiberg C, Rosenthal A, Leclerc D, Broughton WJ, Relic B (1996) |
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Rhizobium spezies NGR234 host-specificity of nodulation locus III contains nod- and fix genes. |
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In Biology of Plant-Microbe Interaction, Intl. Soc. Molecular Plant Microbe Interactions. Stacey, G.; Mullin, B.; Gresshoff, P.M., ed. Pp. 319-324. St. Paul: USA |
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Roepman R, Bauer D, Rosenberg T, van Duijnhoven G, van de Vosse E, Platzer M, Rosenthal A, Ropers HH, Cremers FP, Berger W (1996) |
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Identification of a gene disrupted by a microdeletion in a patient with X-linked retinitis pigmentosa (XLRP) |
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Hum Mol Genet 5: 827-833
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Sandoval N, Bauer D, Brenner V, Coy JF, Drescher B, Kioschis P, Korn B, Nyakatura G, Poustka A, Reichwald K, Rosenthal A, Platzer M (1996) |
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The genomic organization of a human creatine transporter (CRTR) gene located in Xq28 |
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Genomics 35: 383-385
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Uziel T, Savitsky K, Platzer M, Ziv Y, Helbitz T, Nehls M, Boehm T, Rosenthal A, Shiloh Y, Rotman G (1996) |
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Genomic Organization of the ATM gene |
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Genomics 33: 317-320
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Artuc M, Nurnberg W, Platzer M, Czarnetzki BM, Schadendorf D (1995) |
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Differential promoter activity in bengin and malignant human cells of skin origin. |
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Exp Dermatol 4: 317-321
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Glöckner G, Beck CF (1995) |
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Genes involved in light control of sexual differentiation in Chlamydomonas reinhardtii |
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Genetics 141: 937-943
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Jouet M, Rosenthal A, Kenwrick S (1995) |
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Exon 2 of the gene for neural cell adhesion molecule L1 is alternatively spliced in B cells |
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Brain Res Mol Brain Res 30: 378-380
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Platzer C, Meisel C, Vogt K, Platzer M, Volk HD (1995) |
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Up-regulation of monocytic IL-10 by necrosis factor-alpha and cAMP elevating drugs |
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Int Immunol 7: 517-523
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Charnock-Jones DS, Platzer M, Rosenthal A (1994) |
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Extension of incomplete cDNAs (ESTs) by biotin/streptavidin-mediated walking using the polymerase chain reaction |
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J Biotechnol 35: 205-215
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Coecke P, Vits L, Van Camp G, Serville F, Lyonette S, Kenwrick S, Rosenthal A, Wehnert M, Munnich A, Willems PJ (1994) |
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Identification of a 5'splite site mutation in intron 4 of the L1CAM gene in an X-linked hydrocephalus family |
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Hum Mol Genet 3: 671-673
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Jouet M, Rosenthal A, Amstrong G, Macfarlane J, Stevenson R, Paterson J, Metzenberg A, Ionasecu V, Temple K, Kenwrick S (1994) |
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X-linked spactic paraplegia (SPG1), MASA syndrome and X-linked hydrocephalus result from mutations in the L1 gene |
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Nat Genet 7: 402-407
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Platzer C, Volk H-D, Platzer M, Rosenthal A (1994) |
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5'-noncoding sequence of human IL10 gene obtained by oligo-cassette PCR walking |
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DNA Seq 4: 399-401
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Rosenthal A, Platzer M, Charnock-Jones DS (1994) |
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Capture PCR: an efficient method for walking along chromosomal DNA and sDNA |
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The Polymerase Chain Reaction, K.B. Mullis, F. Ferré, R.A. Gibbs eds, BirkhSuser Boston : pp. 222-229
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Buerkle S, Gloeckner G, Beck CF (1993) |
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Chlamydomonas mutants affected in the light-dependent step of sexual differentiation |
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Proc Natl Acad Sci U S A 90: 6981-6985
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Jouet M, Rosenthal A, Macfarlane J, Kenwrick S, Donnai D (1993) |
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A missense mutation confirms the L1 defect in X-linked hydrocephalus (HSAS) |
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Nat Genet 4: 331
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Rosenthal A (1993) |
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DNA sequencing by chemical degradiation using one, two or four different Flourophores |
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Methods in Molecular Biology DNA Sequencing Protocols, edited by H. and A. Griffin, HUMANA Press Inc., Totowa NJ 23: p. 261-280
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Rosenthal A, Brenner S (1993) |
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DNA sequencing by sequential addition of tagged nucleotides. |
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Cold Spring Harb Symp Quant Biol : 222
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Rosenthal A, Charnock-Jones DS (1993) |
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Linear amplification sequencing with dye terminators |
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Methods in Molecular Biology DNA Sequencing Protocols, edited by H. and A. Griffin, HUMANA Press Inc., Totowa NJ, 23: pp. 281-296
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Rosenthal A, Coutelle O, Craxton M (1993) |
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Large-scale production of DNA sequencing templates by microtitre format PCR |
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Nucleic Acids Res 21: 173-174
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Rosenthal A, Jouet M, Kenwrick S (1992) |
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Aberrant splicing of neural cell adhesion molecule L1 mRNA in a family with X-linked hydrocephalus |
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Nat Genet 2: 107-112
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